This is my no space experiment out to 10,000!
No space to 10,000 generations works, but space simulation does not one of the populations seems to die out before it reaches the end of the simulation. I wonder how to stop this from happening? maybe a function that makes it harder for them to find each other when the population is low. Under 2 seems to have run to completion. Now I am trying an under 2 msprime and a under 5 mutation rate (success). Maybe the file i was using was bad trying under 5 10000 gens again (does not work, still dies out).
Are the newts and snake coevolving? - it’s difficult to tell. I can see patterns forming (certain phenotypes are clustering), but the mean phenotype doesn’t move. But the distributions (at least for under 5) look different.
When I run the simulation for longer the phenotype of newts and snakes get large around 3000 -population size might be a consequence of a large phenotype. (looking at the distributions soon)
paste0(“End Space: Generation”, end_gen)
To make these simulations similar to the previous simulation experiments I use the same msprime files to start each of the SLiM simulations. I also keep the parameters the same.
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